2017

proBAMconvert : a conversion tool for proBAM/proBed
V. Olexiouk and G. Menschaert
(2017) JOURNAL OF PROTEOME RESEARCH, 16,

Microbial community dynamics and response to plant growth-promoting microorganisms in the rhizosphere of four common food crops cultivated in hydroponics
C. Sheridan, P. Depuydt, M. De Ro, C. Petit, E. Van Gysegem, P. Delaere, M. Dixon, M. Stasiak, S. Aciksöz, E. Frossard, R. Paradiso, S. De Pascale, V. Ventorino, T. De Meyer, B. Sas and D. Geelen
(2017) MICROBIAL ECOLOGY, 73,

A four-gene promoter methylation marker panel consisting of GREM1, NEURL, LAD1, and NEFH predicts survival of clear cell renal cell cancer patients
I. van Vlodrop, S. Joosten, T. De Meyer, K. Smits, L. Van Neste, V. Melotte, M. Baldewijns, L. Schouten, P. van den Brandt, J. Jeschke, J. Yi, K. Schuebel, N. Ahuja, J. Herman, M. Aarts, F. Bosman, W. Van Criekinge and M. van Engeland
(2017) CLINICAL CANCER RESEARCH, 23,

Epigenetic sampling effects : nephrectomy modifies the clear cell renal cell cancer methylome
C. Van Neste, A. Laird, F. O’Mahony, W. Van Criekinge, D. Deforce, F. Van Nieuwerburgh, T. Powles, D. Harrison, G. Stewart and T. De Meyer
(2017) CELLULAR ONCOLOGY, 40,

Below-ground attack by the root knot nematode Meloidogyne graminicola predisposes rice to blast disease
T. Kyndt, H. Yimer, A. Haeck, R. Singh, D. De Vleesschauwer, S. Denil, T. De Meyer, M. Höfte, K. Demeestere and G. Gheysen
(2017) MOLECULAR PLANT-MICROBE INTERACTIONS, 30,

Methylome analysis of extreme chemoresponsive patients identifies novel markers of platinum sensitivity in high-grade serous ovarian cancer
T. Tomar, N. Alkema, L. Schreuder, G. Meersma, T. De Meyer, W. Van Criekinge, H. Klip, H. Fiegl, E. van Nieuwenhuysen, I. Vergote, M. Widschwendter, E. Schuuring, A. van der Zee, S. de Jong and G. Wisman
(2017) BMC MEDICINE, 15, 116

A urinary biomarker-based risk score correlates with multiparametric MRI for prostate cancer detection
R. Hendriks, M. van der Leest, S. Dijkstra, J. Barentsz, W. Van Criekinge, C. Hulsbergen-van de Kaa, J. Schalken, P. Mulders and I. van Oort
(2017) PROSTATE, 77,

Novel stool-based protein biomarkers for improved colorectal cancer screening : a case-control study
L. Bosch, M. de Wit, T. Pham, V. Coupe, A. Hiemstra, S. Piersma, G. Oudgenoeg, G. Scheffer, S. Mongera, J. Droste, F. Oort, S. van Turenhout, I. Ben Larbi, J. Louwagie, W. Van Criekinge, R. van der Hulst, C. Mulder, B. Carvalho, R. Fijneman, C. Jimenez and G. Meijer
(2017) ANNALS OF INTERNAL MEDICINE, 167,

Differential analysis of genome-wide methylation and gene expression in mesenchymal stem cells of patients with fractures and osteoarthritis
A. del Real, F. Pérez-Campo, A. Fernández, C. Sañudo, C. Ibarbia, M. Pérez-Núñez, W. Van Criekinge, M. Braspenning, M. Alonso, M. Fraga and J. Riancho
(2017) EPIGENETICS, 12,

Genome-wide DNA methylation profiling reveals methylation markers associated with 3q gain for detection of cervical precancer and cancer
W. Verlaat, P. Snijders, P. Novianti, S. Wilting, L. De Strooper, G. Trooskens, J. Vandersmissen, W. Van Criekinge, G. Wisman, C. Meijer, D. Heideman and R. Steenbergen
(2017) CLINICAL CANCER RESEARCH, 23,