2019

High SNP diversity in the non-toxic indigenous Jatropha curcas germplasm widens the potential of this upcoming major biofuel crop species
K. Vandepitte, A. Valdés-Rodríquez, O. Sánchez-Sánchez, H. De Kort, J. Martinez-Herrera, E. García-Pérez, T. De Meyer, A. Pérez-Vázquez, B. Muys and O. Honnay
(2019) ANNALS OF BOTANY, 124,

Evaluation of an epigenetic assay for predicting repeat prostate biopsy outcome in African American men
R. Waterhouse, L. Van Neste, K. Moses, C. Barnswell, J. Silberstein, M. Jalkut, R. Tutrone, J. Sylora, R. Anglade, M. Murdock, Z. Shiffman, T. Vandenberg, N. Shah, M. Carter, M. Krispin, J. Groskopf and W. Van Criekinge
(2019) UROLOGY, 128,

MEXPRESS update 2019
A. Koch, J. Jeschke, W. Van Criekinge, M. van Engeland and T. De Meyer
(2019) NUCLEIC ACIDS RESEARCH, 47,

DeepRibo : a neural network for precise gene annotation of prokaryotes by combining ribosome profiling signal and binding site patterns
J. Clauwaert, G. Menschaert and W. Waegeman
(2019) NUCLEIC ACIDS RESEARCH, 47, e36

Multicenter optimization and validation of a 2-gene mRNA urine test for detection of clinically significant prostate cancer before initial prostate biopsy
A. Haese, G. Trooskens, S. Steyaert, D. Hessels, M. Brawer, V. Vlaeminck-Guillem, A. Ruffion, D. Tilki, J. Schalken, J. Groskopf and W. Van Criekinge
(2019) JOURNAL OF UROLOGY, 202,

Targeted RNA-seq successfully identifies normal and pathogenic splicing events in breast/ovarian cancer susceptibility and Lynch syndrome genes
R. Brandão, K. Mensaert, I. López-Perolio, D. Tserpelis, M. Xenakis, V. Lattimore, L. Walker, A. Kvist, A. Vega, S. Gutiérrez-Enríquez, O. Díez, M. de la Hoya, A. Spurdle, T. De Meyer and M. Blok
(2019) INTERNATIONAL JOURNAL OF CANCER, 145,

Multiple solvent elution, a method to counter the effects of coelution and ion suppression in LC-MS analysis in bottom up proteomics
H. Budamgunta, E. Maes, H. Willems, G. Menschaert, K. Schildermans, A. Kumar, K. Boonen and G. Baggerman
(2019) JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES, 1124,

Clinically significant prostate cancer diagnosed using a urinary molecular biomarker-based risk score : two case reports
P. Minnee, D. Hessels, J. Schalken and W. Van Criekinge
(2019) BMC UROLOGY, 19, 124

2018

An update on sORFs.org : a repository of small ORFs identified by ribosome profiling
V. Olexiouk, W. Van Criekinge and G. Menschaert
(2018) NUCLEIC ACIDS RESEARCH, 46,

mQC : a post-mapping data exploration tool for ribosome profiling
S. Verbruggen and G. Menschaert
(2018) COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE, 181, 104806