Publications by Gerben Menschaert.

2013

Colorado potato beetle (Coleoptera) gut transcriptome analysis: expression of RNA interference-related genes
L. Swevers, H. Huvenne, G. Menschaert, D. Kontogiannatos, A. Kourti, Y. Pauchet, R. Ffrench-Constant and G. Smagghe
(2013) INSECT MOLECULAR BIOLOGY, 22,

Improving the identification rate of endogenous peptides using electron transfer dissociation and collision-induced dissociation
E. Hayakawa, G. Menschaert, P. De Bock, W. Luyten, K. Gevaert, G. Baggerman and L. Schoofs
(2013) JOURNAL OF PROTEOME RESEARCH, 12,

Combining in silico prediction and ribosome profiling in a genome-wide search for novel putatively coding sORFs
J. Crappé, W. Van Criekinge, G. Trooskens, E. Hayakawa, W. Luyten, G. Baggerman and G. Menschaert
(2013) BMC GENOMICS, 14, 648

PIUS: peptide identification by unbiased search
E. Costa, G. Menschaert, W. Luyten, K. De Grave and J. Ramon
(2013) BIOINFORMATICS, 29,

Deep proteome coverage based on ribosome profiling aids mass spectrometry-based protein and peptide discovery and provides evidence of alternative translation products and near-cognate translation initiation events
G. Menschaert, W. Van Criekinge, T. Notelaers, A. Koch, J. Crappé, K. Gevaert and P. Van Damme
(2013) MOLECULAR & CELLULAR PROTEOMICS, 12,

Quality evaluation of methyl binding domain based kits for enrichment DNA-methylation sequencing
T. De Meyer, E. Mampaey, M. Vlemmix, S. Denil, G. Trooskens, J. Renard, S. De Keulenaer, P. Dehan, G. Menschaert and W. Van Criekinge
(2013) PLOS ONE, 8, e59068